Index

B

banner() (in module digimuh.console)

C

check_null_rates() (in module digimuh.validate_db) check_referential_integrity() (in module digimuh.validate_db) check_table_counts() (in module digimuh.validate_db) check_temporal_coverage() (in module digimuh.validate_db) check_value_ranges() (in module digimuh.validate_db) compute_daily_entropy() (in module digimuh.analysis_12_motility_entropy)

compute_digestive_efficiency() (in module digimuh.analysis_06_digestive) compute_disruption_index() (in module digimuh.analysis_11_circadian) compute_lagged_correlations() (in module digimuh.analysis_06_digestive) compute_predisease_trends() (in module digimuh.analysis_12_motility_entropy) compute_production_impact() (in module digimuh.analysis_03_heat_stress) connect_db() (in module digimuh.analysis_utils)

D

database (digimuh.config.DigiMuhConfig attribute) digimuh module digimuh.analysis_01_ketosis module digimuh.analysis_03_heat_stress module digimuh.analysis_06_digestive module digimuh.analysis_11_circadian module

digimuh.analysis_12_motility_entropy module digimuh.analysis_utils module digimuh.config module digimuh.console module digimuh.validate_db module DigiMuhConfig (class in digimuh.config) done() (in module digimuh.console)

E

extract_circadian_features() (in module digimuh.analysis_11_circadian)

F

fit_circadian_harmonic() (in module digimuh.analysis_11_circadian)

fit_dose_response() (in module digimuh.analysis_03_heat_stress)

K

kv() (in module digimuh.console)

kv_pair() (in module digimuh.console)

L

load_circadian_data() (in module digimuh.analysis_11_circadian) load_config() (in module digimuh.config)

load_digestive_data() (in module digimuh.analysis_06_digestive) load_heat_data() (in module digimuh.analysis_03_heat_stress) load_ketosis_data() (in module digimuh.analysis_01_ketosis)

M

main() (in module digimuh.analysis_01_ketosis) (in module digimuh.analysis_03_heat_stress) (in module digimuh.analysis_06_digestive) (in module digimuh.analysis_11_circadian) (in module digimuh.analysis_12_motility_entropy) (in module digimuh.config) (in module digimuh.validate_db) module digimuh digimuh.analysis_01_ketosis digimuh.analysis_03_heat_stress digimuh.analysis_06_digestive digimuh.analysis_11_circadian digimuh.analysis_12_motility_entropy digimuh.analysis_utils digimuh.config digimuh.console digimuh.validate_db

N

n_jobs (digimuh.config.DigiMuhConfig attribute)

O

output (digimuh.config.DigiMuhConfig attribute)

P

permutation_entropy() (in module digimuh.analysis_12_motility_entropy) plot_circadian_results() (in module digimuh.analysis_11_circadian) plot_digestive_results() (in module digimuh.analysis_06_digestive) plot_entropy_results() (in module digimuh.analysis_12_motility_entropy)

plot_heat_overview() (in module digimuh.analysis_03_heat_stress) plot_ketosis_overview() (in module digimuh.analysis_01_ketosis) print_config() (in module digimuh.config) progress() (in module digimuh.console)

Q

query_df() (in module digimuh.analysis_utils)

R

reset_steps() (in module digimuh.console)

result_table() (in module digimuh.console)

S

sample_entropy() (in module digimuh.analysis_12_motility_entropy) save_fig() (in module digimuh.analysis_utils) section() (in module digimuh.console) setup_interactive() (in module digimuh.config)

setup_logging() (in module digimuh.console) setup_plotting() (in module digimuh.analysis_utils) sigmoid() (in module digimuh.analysis_03_heat_stress) smaxtec_drink_correction (digimuh.config.DigiMuhConfig attribute) stars_styled() (in module digimuh.console)

T

tierauswahl (digimuh.config.DigiMuhConfig attribute)

train_ketosis_classifier() (in module digimuh.analysis_01_ketosis)